Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 AC243591.1-201ENST00000452967 1364 ntBASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 IL9RP2-201ENST00000423948 1312 ntBASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 SPDYE21P-201ENST00000413323 827 ntBASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 OR7E14P-202ENST00000530490 1290 ntBASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 MIR7706-201ENST00000613747 67 ntBASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 BX640515.1-201ENST00000617215 977 ntBASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SRGAP2CP0DJJ0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 AC139887.3-201ENST00000568585 713 ntBASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 AL022326.1-202ENST00000641533 845 ntBASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRGAP2CP0DJJ0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 AL390961.4-201ENST00000623958 2535 ntBASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 AC090340.1-201ENST00000620778 4980 ntBASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 IGHV3-52-201ENST00000519770 353 ntBASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 AC073592.4-201ENST00000623827 446 ntBASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 AC116407.3-201ENST00000623905 1129 ntBASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRGAP2CP0DJJ0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms