Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CD4P01730 BCL2-203ENST00000589955 5011 ntBASIC19.38■□□□□ 0.69
CD4P01730 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.38■□□□□ 0.69
CD4P01730 AC019129.2-201ENST00000609837 1235 ntBASIC19.38■□□□□ 0.69
CD4P01730 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD4P01730 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.38■□□□□ 0.69
CD4P01730 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.38■□□□□ 0.69
CD4P01730 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD4P01730 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD4P01730 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CD4P01730 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.37■□□□□ 0.69
CD4P01730 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 AL139400.1-201ENST00000366220 510 ntBASIC19.37■□□□□ 0.69
CD4P01730 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
CD4P01730 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.37■□□□□ 0.69
CD4P01730 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.37■□□□□ 0.69
CD4P01730 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.37■□□□□ 0.69
CD4P01730 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.37■□□□□ 0.69
CD4P01730 OR7E47P-204ENST00000575924 449 ntBASIC19.37■□□□□ 0.69
CD4P01730 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
CD4P01730 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.37■□□□□ 0.69
CD4P01730 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.37■□□□□ 0.69
CD4P01730 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD4P01730 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
CD4P01730 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
CD4P01730 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.36■□□□□ 0.69
CD4P01730 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 AL096828.2-201ENST00000567259 1965 ntBASIC19.36■□□□□ 0.69
CD4P01730 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.36■□□□□ 0.69
CD4P01730 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.36■□□□□ 0.69
CD4P01730 AP000344.2-201ENST00000512987 629 ntBASIC19.36■□□□□ 0.69
CD4P01730 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.36■□□□□ 0.69
CD4P01730 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CD4P01730 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.36■□□□□ 0.69
CD4P01730 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.36■□□□□ 0.69
CD4P01730 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CD4P01730 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CD4P01730 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CD4P01730 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD4P01730 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.35■□□□□ 0.69
CD4P01730 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CD4P01730 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CD4P01730 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.35■□□□□ 0.69
CD4P01730 BCAR1-209ENST00000546196 1340 ntBASIC19.35■□□□□ 0.69
CD4P01730 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 TSEN15P1-201ENST00000423257 515 ntBASIC19.35■□□□□ 0.69
CD4P01730 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.35■□□□□ 0.69
CD4P01730 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 ACTG1P14-201ENST00000446382 1122 ntBASIC19.35■□□□□ 0.69
CD4P01730 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.35■□□□□ 0.69
CD4P01730 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.35■□□□□ 0.69
CD4P01730 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.35■□□□□ 0.69
CD4P01730 SPCS2P1-201ENST00000561636 679 ntBASIC19.35■□□□□ 0.69
CD4P01730 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CD4P01730 AC011467.4-201ENST00000594891 528 ntBASIC19.35■□□□□ 0.69
CD4P01730 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CD4P01730 AC093028.1-201ENST00000622998 982 ntBASIC19.35■□□□□ 0.69
CD4P01730 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 AC135776.1-201ENST00000319817 2481 ntBASIC19.35■□□□□ 0.69
CD4P01730 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms