Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.35■□□□□ 0.05
UPK1BO75841 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.35■□□□□ 0.05
UPK1BO75841 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.35■□□□□ 0.05
UPK1BO75841 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.35■□□□□ 0.05
UPK1BO75841 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.35■□□□□ 0.05
UPK1BO75841 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.35■□□□□ 0.05
UPK1BO75841 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.35■□□□□ 0.05
UPK1BO75841 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.35■□□□□ 0.05
UPK1BO75841 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.35■□□□□ 0.05
UPK1BO75841 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.35■□□□□ 0.05
UPK1BO75841 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.35■□□□□ 0.05
UPK1BO75841 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.35■□□□□ 0.05
UPK1BO75841 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
UPK1BO75841 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
UPK1BO75841 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UPK1BO75841 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.35■□□□□ 0.05
UPK1BO75841 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
UPK1BO75841 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1BO75841 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.34■□□□□ 0.05
UPK1BO75841 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1BO75841 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.34■□□□□ 0.05
UPK1BO75841 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1BO75841 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1BO75841 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1BO75841 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UPK1BO75841 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.34■□□□□ 0.05
UPK1BO75841 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.34■□□□□ 0.05
UPK1BO75841 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
UPK1BO75841 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
UPK1BO75841 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1BO75841 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.34■□□□□ 0.05
UPK1BO75841 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1BO75841 Z85996.1-201ENST00000494644 937 ntBASIC15.34■□□□□ 0.05
UPK1BO75841 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.34■□□□□ 0.05
UPK1BO75841 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.34■□□□□ 0.05
UPK1BO75841 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 OR10C1-204ENST00000622521 1039 ntBASIC15.34■□□□□ 0.05
UPK1BO75841 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1BO75841 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1BO75841 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.34■□□□□ 0.05
UPK1BO75841 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
UPK1BO75841 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1BO75841 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
UPK1BO75841 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1BO75841 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1BO75841 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.33■□□□□ 0.05
UPK1BO75841 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.33■□□□□ 0.05
UPK1BO75841 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
UPK1BO75841 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
UPK1BO75841 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
UPK1BO75841 AC092053.1-201ENST00000605787 1936 ntBASIC15.33■□□□□ 0.05
UPK1BO75841 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UPK1BO75841 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
UPK1BO75841 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
UPK1BO75841 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
UPK1BO75841 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UPK1BO75841 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms