Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH17O14917 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH17O14917 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDH17O14917 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH17O14917 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDH17O14917 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDH17O14917 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH17O14917 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDH17O14917 IFNL4P1-201ENST00000607083 540 ntBASIC16.84■□□□□ 0.29
PCDH17O14917 AC114341.1-201ENST00000618070 349 ntBASIC16.84■□□□□ 0.29
PCDH17O14917 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDH17O14917 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDH17O14917 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 PP12613-201ENST00000424958 2230 ntBASIC16.84■□□□□ 0.29
PCDH17O14917 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH17O14917 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH17O14917 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.83■□□□□ 0.29
PCDH17O14917 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.83■□□□□ 0.29
PCDH17O14917 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
PCDH17O14917 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH17O14917 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH17O14917 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
PCDH17O14917 KRT8P10-201ENST00000450021 1447 ntBASIC16.83■□□□□ 0.28
PCDH17O14917 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH17O14917 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDH17O14917 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.83■□□□□ 0.28
PCDH17O14917 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH17O14917 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH17O14917 PRORSD1P-202ENST00000563365 2154 ntBASIC16.83■□□□□ 0.28
PCDH17O14917 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH17O14917 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH17O14917 LINC00602-201ENST00000629776 2065 ntBASIC16.83■□□□□ 0.28
PCDH17O14917 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH17O14917 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH17O14917 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH17O14917 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH17O14917 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDH17O14917 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PCDH17O14917 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDH17O14917 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH17O14917 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 AC006116.8-202ENST00000587620 1550 ntBASIC16.82■□□□□ 0.28
PCDH17O14917 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH17O14917 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 AC022898.2-201ENST00000616822 1312 ntBASIC16.82■□□□□ 0.28
PCDH17O14917 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH17O14917 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH17O14917 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH17O14917 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH17O14917 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH17O14917 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.82■□□□□ 0.28
PCDH17O14917 AP005901.3-202ENST00000581653 237 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms