Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.62■□□□□ 0.25
CLDN4O14493 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN4O14493 AC111152.3-201ENST00000569699 673 ntBASIC16.62■□□□□ 0.25
CLDN4O14493 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN4O14493 LINC01451-201ENST00000623792 534 ntBASIC16.62■□□□□ 0.25
CLDN4O14493 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN4O14493 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN4O14493 AC006116.8-202ENST00000587620 1550 ntBASIC16.62■□□□□ 0.25
CLDN4O14493 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN4O14493 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN4O14493 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN4O14493 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN4O14493 AC012317.2-201ENST00000623305 2251 ntBASIC16.62■□□□□ 0.25
CLDN4O14493 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN4O14493 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CLDN4O14493 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN4O14493 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN4O14493 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN4O14493 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN4O14493 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN4O14493 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN4O14493 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN4O14493 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN4O14493 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN4O14493 GNAS-203ENST00000306120 1878 ntBASIC16.61■□□□□ 0.25
CLDN4O14493 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN4O14493 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN4O14493 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN4O14493 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN4O14493 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN4O14493 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN4O14493 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN4O14493 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN4O14493 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN4O14493 IGHV3-52-201ENST00000519770 353 ntBASIC16.61■□□□□ 0.25
CLDN4O14493 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN4O14493 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN4O14493 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN4O14493 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN4O14493 AC012313.10-201ENST00000623509 926 ntBASIC16.61■□□□□ 0.25
CLDN4O14493 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN4O14493 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN4O14493 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN4O14493 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN4O14493 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN4O14493 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN4O14493 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN4O14493 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN4O14493 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLDN4O14493 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN4O14493 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN4O14493 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN4O14493 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CLDN4O14493 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN4O14493 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN4O14493 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN4O14493 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLDN4O14493 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN4O14493 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN4O14493 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN4O14493 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN4O14493 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.6■□□□□ 0.25
CLDN4O14493 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN4O14493 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.6■□□□□ 0.25
CLDN4O14493 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLDN4O14493 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN4O14493 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN4O14493 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN4O14493 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN4O14493 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN4O14493 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN4O14493 NOC2LP2-201ENST00000407594 1944 ntBASIC16.6■□□□□ 0.25
CLDN4O14493 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN4O14493 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN4O14493 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN4O14493 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN4O14493 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CLDN4O14493 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN4O14493 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN4O14493 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN4O14493 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN4O14493 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN4O14493 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN4O14493 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN4O14493 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN4O14493 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLDN4O14493 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN4O14493 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN4O14493 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN4O14493 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN4O14493 MYCLP1-201ENST00000372451 1075 ntBASIC16.59■□□□□ 0.25
CLDN4O14493 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN4O14493 AL450487.1-201ENST00000426799 995 ntBASIC16.59■□□□□ 0.25
CLDN4O14493 DUSP5P1-201ENST00000441325 1139 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms