Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 HTR7P1-202ENST00000624664 4411 ntBASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 AC009113.1-201ENST00000570267 2443 ntBASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 AC104581.1-202ENST00000635932 2618 ntBASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 AC040169.1-201ENST00000565382 521 ntBASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV19A0A0A6YYK7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 AC138028.4-201ENST00000564984 1845 ntBASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms