Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHAC2Q9Y5I4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PCDHAC2Q9Y5I4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PCDHAC2Q9Y5I4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHAC2Q9Y5I4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHAC2Q9Y5I4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.83■□□□□ 0.92
PCDHAC2Q9Y5I4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHAC2Q9Y5I4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHAC2Q9Y5I4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 AC116407.2-201ENST00000613639 860 ntBASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHAC2Q9Y5I4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 AC002558.1-201ENST00000488906 803 ntBASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHAC2Q9Y5I4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHAC2Q9Y5I4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHAC2Q9Y5I4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHAC2Q9Y5I4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHAC2Q9Y5I4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHAC2Q9Y5I4 REXO1L11P-201ENST00000620964 1927 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms