Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB7Q9Y5E2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB7Q9Y5E2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB7Q9Y5E2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB7Q9Y5E2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB7Q9Y5E2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB7Q9Y5E2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB7Q9Y5E2 REXO1L9P-201ENST00000604264 2108 ntBASIC18.91■□□□□ 0.62
PCDHB7Q9Y5E2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
PCDHB7Q9Y5E2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 AP002414.1-201ENST00000391405 1147 ntBASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 LINC00982-205ENST00000420957 435 ntBASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 HTR5BP-201ENST00000430851 1154 ntBASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 HMGN1P19-201ENST00000436976 333 ntBASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 ALG1L5P-201ENST00000482043 771 ntBASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 AC002558.1-201ENST00000488906 803 ntBASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB7Q9Y5E2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB7Q9Y5E2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB7Q9Y5E2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
PCDHB7Q9Y5E2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB7Q9Y5E2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB7Q9Y5E2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB7Q9Y5E2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 AL353135.1-201ENST00000606729 504 ntBASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 KRT18P28-201ENST00000453838 1332 ntBASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 AL020996.1-203ENST00000536896 2307 ntBASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB7Q9Y5E2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 AC254562.1-201ENST00000417586 456 ntBASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB7Q9Y5E2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms