Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 AC093827.2-201ENST00000512654 315 ntBASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 AC024563.2-201ENST00000603282 481 ntBASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPS28Q9Y2Q9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MRPS28Q9Y2Q9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
MRPS28Q9Y2Q9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.02
MRPS28Q9Y2Q9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
MRPS28Q9Y2Q9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.21■□□□□ 0.02
MRPS28Q9Y2Q9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MRPS28Q9Y2Q9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MRPS28Q9Y2Q9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 AC034232.1-201ENST00000506026 1064 ntBASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPS28Q9Y2Q9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 MMP23A-201ENST00000234610 1017 ntBASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 ECEL1P3-201ENST00000427961 737 ntBASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms