Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 AC099336.1-202ENST00000602961 463 ntBASIC19.8■□□□□ 0.76
PUF60Q9UHX1 AC024563.2-201ENST00000603282 481 ntBASIC19.8■□□□□ 0.76
PUF60Q9UHX1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 AC084018.2-201ENST00000613093 2607 ntBASIC19.8■□□□□ 0.76
PUF60Q9UHX1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PUF60Q9UHX1 AC093677.2-201ENST00000600169 1863 ntBASIC19.79■□□□□ 0.76
PUF60Q9UHX1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 LINC00167-201ENST00000530583 1419 ntBASIC19.79■□□□□ 0.76
PUF60Q9UHX1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 AC079781.3-201ENST00000449110 356 ntBASIC19.79■□□□□ 0.76
PUF60Q9UHX1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 REXO1L9P-201ENST00000604264 2108 ntBASIC19.79■□□□□ 0.76
PUF60Q9UHX1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PUF60Q9UHX1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 MYLKP1-201ENST00000509077 1580 ntBASIC19.78■□□□□ 0.76
PUF60Q9UHX1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 TNRC18P3-201ENST00000441896 2691 ntBASIC19.78■□□□□ 0.76
PUF60Q9UHX1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 IGHGP-201ENST00000390555 1178 ntBASIC19.78■□□□□ 0.76
PUF60Q9UHX1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 AL022342.1-201ENST00000400363 863 ntBASIC19.78■□□□□ 0.76
PUF60Q9UHX1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 AL121912.1-201ENST00000603683 238 ntBASIC19.78■□□□□ 0.76
PUF60Q9UHX1 AL353801.3-201ENST00000609898 542 ntBASIC19.78■□□□□ 0.76
PUF60Q9UHX1 AC124864.1-201ENST00000623408 392 ntBASIC19.78■□□□□ 0.76
PUF60Q9UHX1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PUF60Q9UHX1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PUF60Q9UHX1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PUF60Q9UHX1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PUF60Q9UHX1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PUF60Q9UHX1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PUF60Q9UHX1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PUF60Q9UHX1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PUF60Q9UHX1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms