Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.88■□□□□ 0.77
COL20A1Q9P218 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.88■□□□□ 0.77
COL20A1Q9P218 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL20A1Q9P218 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 GPALPP1-207ENST00000611650 899 ntBASIC19.87■□□□□ 0.77
COL20A1Q9P218 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL20A1Q9P218 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
COL20A1Q9P218 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 LINC00982-205ENST00000420957 435 ntBASIC19.86■□□□□ 0.77
COL20A1Q9P218 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 AL353135.1-201ENST00000606729 504 ntBASIC19.86■□□□□ 0.77
COL20A1Q9P218 PGM5P2-202ENST00000637225 1043 ntBASIC19.86■□□□□ 0.77
COL20A1Q9P218 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL20A1Q9P218 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.86■□□□□ 0.77
COL20A1Q9P218 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL20A1Q9P218 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL20A1Q9P218 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL20A1Q9P218 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL20A1Q9P218 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 MYCLP1-201ENST00000372451 1075 ntBASIC19.85■□□□□ 0.77
COL20A1Q9P218 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 KRT18P13-201ENST00000400056 1290 ntBASIC19.85■□□□□ 0.77
COL20A1Q9P218 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL20A1Q9P218 AL591424.1-201ENST00000442569 1213 ntBASIC19.85■□□□□ 0.77
COL20A1Q9P218 KRT18P2-201ENST00000447938 1258 ntBASIC19.85■□□□□ 0.77
COL20A1Q9P218 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.85■□□□□ 0.77
COL20A1Q9P218 RPS15P9-201ENST00000494093 319 ntBASIC19.85■□□□□ 0.77
COL20A1Q9P218 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 AC092865.5-201ENST00000545435 363 ntBASIC19.85■□□□□ 0.77
COL20A1Q9P218 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 AC139530.3-201ENST00000620344 690 ntBASIC19.85■□□□□ 0.77
COL20A1Q9P218 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL20A1Q9P218 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL20A1Q9P218 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL20A1Q9P218 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL20A1Q9P218 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL20A1Q9P218 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COL20A1Q9P218 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL20A1Q9P218 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms