Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 RNF152P1-201ENST00000397754 604 ntBASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 FAM8A6P-201ENST00000407496 1135 ntBASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCM2LQ9NUG4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 AC092647.4-201ENST00000457211 535 ntBASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 AC011506.1-201ENST00000474329 610 ntBASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 DOC2GP-204ENST00000639052 2548 ntBASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.8■□□□□ 0.28
CCM2LQ9NUG4 KRT8P7-201ENST00000533003 1432 ntBASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 HMGA1P5-201ENST00000412453 271 ntBASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 AC093458.2-201ENST00000623150 629 ntBASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms