Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 RPSAP43-201ENST00000402237 625 ntBASIC20.03■□□□□ 0.8
A1CFQ9NQ94 UPF3AP3-201ENST00000420996 769 ntBASIC20.03■□□□□ 0.8
A1CFQ9NQ94 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.03■□□□□ 0.8
A1CFQ9NQ94 GPX1P2-201ENST00000429271 606 ntBASIC20.03■□□□□ 0.8
A1CFQ9NQ94 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 PCDHB18P-201ENST00000524813 2368 ntBASIC20.02■□□□□ 0.8
A1CFQ9NQ94 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
A1CFQ9NQ94 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
A1CFQ9NQ94 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.02■□□□□ 0.79
A1CFQ9NQ94 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
A1CFQ9NQ94 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.02■□□□□ 0.79
A1CFQ9NQ94 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.02■□□□□ 0.79
A1CFQ9NQ94 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 KRT18P2-201ENST00000447938 1258 ntBASIC20.01■□□□□ 0.79
A1CFQ9NQ94 STK19B-204ENST00000512515 211 ntBASIC20.01■□□□□ 0.79
A1CFQ9NQ94 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.01■□□□□ 0.79
A1CFQ9NQ94 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
A1CFQ9NQ94 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
A1CFQ9NQ94 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
A1CFQ9NQ94 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
A1CFQ9NQ94 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20■□□□□ 0.79
A1CFQ9NQ94 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20■□□□□ 0.79
A1CFQ9NQ94 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20■□□□□ 0.79
A1CFQ9NQ94 AC104581.1-202ENST00000635932 2618 ntBASIC20■□□□□ 0.79
A1CFQ9NQ94 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20■□□□□ 0.79
A1CFQ9NQ94 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20■□□□□ 0.79
A1CFQ9NQ94 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
A1CFQ9NQ94 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20■□□□□ 0.79
A1CFQ9NQ94 AC023274.1-201ENST00000418278 595 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms