Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 AL450487.1-201ENST00000426799 995 ntBASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 AC067852.2-201ENST00000590513 2313 ntBASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCM2Q9BSQ5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 SIRPAP1-201ENST00000448467 1770 ntBASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 AC005104.2-201ENST00000427818 678 ntBASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 AC111152.3-201ENST00000569699 673 ntBASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 AL355312.1-201ENST00000407115 2176 ntBASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2Q9BSQ5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 LINC00304-203ENST00000565008 1864 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms