Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.9□□□□□ -0.34
MUC4Q99102 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
MUC4Q99102 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.9□□□□□ -0.34
MUC4Q99102 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 DDX43P3-201ENST00000441064 443 ntBASIC12.9□□□□□ -0.34
MUC4Q99102 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.9□□□□□ -0.34
MUC4Q99102 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.9□□□□□ -0.34
MUC4Q99102 RN7SL510P-201ENST00000581311 263 ntBASIC12.9□□□□□ -0.34
MUC4Q99102 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.9□□□□□ -0.34
MUC4Q99102 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
MUC4Q99102 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
MUC4Q99102 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
MUC4Q99102 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
MUC4Q99102 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.89□□□□□ -0.35
MUC4Q99102 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.89□□□□□ -0.35
MUC4Q99102 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.89□□□□□ -0.35
MUC4Q99102 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC12.89□□□□□ -0.35
MUC4Q99102 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.89□□□□□ -0.35
MUC4Q99102 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.89□□□□□ -0.35
MUC4Q99102 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.89□□□□□ -0.35
MUC4Q99102 VENTXP5-201ENST00000523979 775 ntBASIC12.89□□□□□ -0.35
MUC4Q99102 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.89□□□□□ -0.35
MUC4Q99102 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.89□□□□□ -0.35
MUC4Q99102 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
MUC4Q99102 HYMAI.1-201ENST00000620949 238 ntBASIC12.89□□□□□ -0.35
MUC4Q99102 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.89□□□□□ -0.35
MUC4Q99102 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
MUC4Q99102 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.89□□□□□ -0.35
MUC4Q99102 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
MUC4Q99102 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
MUC4Q99102 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.89□□□□□ -0.35
MUC4Q99102 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MUC4Q99102 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.88□□□□□ -0.35
MUC4Q99102 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.88□□□□□ -0.35
MUC4Q99102 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.88□□□□□ -0.35
MUC4Q99102 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.88□□□□□ -0.35
MUC4Q99102 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
MUC4Q99102 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.88□□□□□ -0.35
MUC4Q99102 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.88□□□□□ -0.35
MUC4Q99102 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.88□□□□□ -0.35
MUC4Q99102 AC140113.3-201ENST00000605663 199 ntBASIC12.88□□□□□ -0.35
MUC4Q99102 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.88□□□□□ -0.35
MUC4Q99102 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.88□□□□□ -0.35
MUC4Q99102 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
MUC4Q99102 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.88□□□□□ -0.35
MUC4Q99102 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.88□□□□□ -0.35
MUC4Q99102 AC246785.2-201ENST00000432512 513 ntBASIC12.88□□□□□ -0.35
MUC4Q99102 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.88□□□□□ -0.35
MUC4Q99102 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.88□□□□□ -0.35
MUC4Q99102 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.88□□□□□ -0.35
MUC4Q99102 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 AL136038.4-201ENST00000603606 1261 ntBASIC12.88□□□□□ -0.35
MUC4Q99102 LINC01451-201ENST00000623792 534 ntBASIC12.88□□□□□ -0.35
MUC4Q99102 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
MUC4Q99102 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.88□□□□□ -0.35
MUC4Q99102 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MUC4Q99102 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms