Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 DOC2GP-204ENST00000639052 2548 ntBASIC14.32□□□□□ -0.12
RAB40CQ96S21 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB40CQ96S21 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40CQ96S21 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 AC060834.1-201ENST00000443027 2032 ntBASIC14.31□□□□□ -0.12
RAB40CQ96S21 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 AC097488.1-201ENST00000507834 756 ntBASIC14.31□□□□□ -0.12
RAB40CQ96S21 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 AC046158.3-201ENST00000624947 2558 ntBASIC14.31□□□□□ -0.12
RAB40CQ96S21 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 AL135905.2-201ENST00000584934 1404 ntBASIC14.31□□□□□ -0.12
RAB40CQ96S21 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms