Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 CEND1P1-201ENST00000451006 455 ntBASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 AL096865.1-201ENST00000606796 927 ntBASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 AL078644.1-201ENST00000609881 752 ntBASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
U2AF1L4Q8WU68 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
U2AF1L4Q8WU68 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
U2AF1L4Q8WU68 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
U2AF1L4Q8WU68 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 AC079776.2-201ENST00000641154 1609 ntBASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 AC027612.4-201ENST00000605371 583 ntBASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 AC093028.1-201ENST00000622998 982 ntBASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2AF1L4Q8WU68 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 AL390961.4-201ENST00000623958 2535 ntBASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 PAWRP1-201ENST00000451083 565 ntBASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 AC126763.1-201ENST00000552015 2118 ntBASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 LINC00602-201ENST00000629776 2065 ntBASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 AC099343.3-201ENST00000605834 2503 ntBASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
U2AF1L4Q8WU68 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms