Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL358472.5-202ENST00000641448 1267 ntBASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 IGHV3-42-201ENST00000520410 361 ntBASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 AC140878.1-201ENST00000565277 250 ntBASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 AC084121.4-201ENST00000641598 221 ntBASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 AF228730.8-201ENST00000642140 221 ntBASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 AC109635.5-201ENST00000533593 962 ntBASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 AC093484.2-201ENST00000580996 2166 ntBASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
ALMS1Q8TCU4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 UXT-AS1-201ENST00000590504 1525 ntBASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 AC100757.3-201ENST00000622361 1406 ntBASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 TSSK5P-201ENST00000423978 907 ntBASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 FAM86C2P-203ENST00000528684 1004 ntBASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ALMS1Q8TCU4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 DUTP2-201ENST00000519164 463 ntBASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 MIR4525-201ENST00000580000 75 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms