Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 GFI1B-201ENST00000339463 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 NTM-203ENST00000374791 3040 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 SLC9A7P1-201ENST00000554295 3311 ntBASIC10.95□□□□□ -0.66
SVIPQ8NHG7 PPT1-213ENST00000641319 2388 ntBASIC10.95□□□□□ -0.66
SVIPQ8NHG7 ZNF221-204ENST00000592350 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 AC068831.1-202ENST00000557804 2159 ntTSL 3 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC10.95□□□□□ -0.66
SVIPQ8NHG7 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 QRSL1-201ENST00000369044 2158 ntTSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 AC011498.7-201ENST00000624986 2027 ntBASIC10.94□□□□□ -0.66
SVIPQ8NHG7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 UBQLN4P1-201ENST00000461599 1801 ntBASIC10.94□□□□□ -0.66
SVIPQ8NHG7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms