Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 AC010460.3-201ENST00000511359 1579 ntBASIC16.52■□□□□ 0.24
NUP43Q8NFH3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 AC005104.2-201ENST00000427818 678 ntBASIC16.52■□□□□ 0.24
NUP43Q8NFH3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.52■□□□□ 0.23
NUP43Q8NFH3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 AC116407.4-201ENST00000623319 1061 ntBASIC16.51■□□□□ 0.23
NUP43Q8NFH3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.51■□□□□ 0.23
NUP43Q8NFH3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AC108860.2-201ENST00000562760 2183 ntBASIC16.5■□□□□ 0.23
NUP43Q8NFH3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 COX5BP2-201ENST00000392354 334 ntBASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms