Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
USP38Q8NB14 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.69■□□□□ 0.74
USP38Q8NB14 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP38Q8NB14 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.69■□□□□ 0.74
USP38Q8NB14 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP38Q8NB14 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.69■□□□□ 0.74
USP38Q8NB14 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP38Q8NB14 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP38Q8NB14 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP38Q8NB14 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.69■□□□□ 0.74
USP38Q8NB14 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.69■□□□□ 0.74
USP38Q8NB14 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
USP38Q8NB14 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP38Q8NB14 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP38Q8NB14 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.69■□□□□ 0.74
USP38Q8NB14 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.69■□□□□ 0.74
USP38Q8NB14 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.69■□□□□ 0.74
USP38Q8NB14 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP38Q8NB14 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.69■□□□□ 0.74
USP38Q8NB14 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP38Q8NB14 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.69■□□□□ 0.74
USP38Q8NB14 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.69■□□□□ 0.74
USP38Q8NB14 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.68■□□□□ 0.74
USP38Q8NB14 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
USP38Q8NB14 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.68■□□□□ 0.74
USP38Q8NB14 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.68■□□□□ 0.74
USP38Q8NB14 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
USP38Q8NB14 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
USP38Q8NB14 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.68■□□□□ 0.74
USP38Q8NB14 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.68■□□□□ 0.74
USP38Q8NB14 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
USP38Q8NB14 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
USP38Q8NB14 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP38Q8NB14 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.67■□□□□ 0.74
USP38Q8NB14 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.67■□□□□ 0.74
USP38Q8NB14 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.67■□□□□ 0.74
USP38Q8NB14 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.67■□□□□ 0.74
USP38Q8NB14 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.67■□□□□ 0.74
USP38Q8NB14 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.67■□□□□ 0.74
USP38Q8NB14 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.67■□□□□ 0.74
USP38Q8NB14 AC040169.1-201ENST00000565382 521 ntBASIC19.67■□□□□ 0.74
USP38Q8NB14 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.67■□□□□ 0.74
USP38Q8NB14 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.67■□□□□ 0.74
USP38Q8NB14 AL596442.2-201ENST00000610240 980 ntBASIC19.67■□□□□ 0.74
USP38Q8NB14 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
USP38Q8NB14 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 ESPNP-201ENST00000270691 2015 ntBASIC19.67■□□□□ 0.74
USP38Q8NB14 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.67■□□□□ 0.74
USP38Q8NB14 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
USP38Q8NB14 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
USP38Q8NB14 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.67■□□□□ 0.74
USP38Q8NB14 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.67■□□□□ 0.74
USP38Q8NB14 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
USP38Q8NB14 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP38Q8NB14 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.66■□□□□ 0.74
USP38Q8NB14 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP38Q8NB14 GMCL1P1-201ENST00000463439 1581 ntBASIC19.66■□□□□ 0.74
USP38Q8NB14 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP38Q8NB14 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.66■□□□□ 0.74
USP38Q8NB14 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP38Q8NB14 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.66■□□□□ 0.74
USP38Q8NB14 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.66■□□□□ 0.74
USP38Q8NB14 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.66■□□□□ 0.74
USP38Q8NB14 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.66■□□□□ 0.74
USP38Q8NB14 AC097374.2-201ENST00000618617 1306 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms