Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 KRT8P47-201ENST00000604727 1398 ntBASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 MME-217ENST00000616757 1315 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 PRORSD1P-201ENST00000295112 541 ntBASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 AC002558.1-201ENST00000488906 803 ntBASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 AP000525.1-201ENST00000608286 694 ntBASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 AL139327.4-201ENST00000612362 153 ntBASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 ANKRD20A8P-203ENST00000641373 517 ntBASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 AL118508.1-201ENST00000613502 2345 ntBASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 KRT17P2-201ENST00000300992 1314 ntBASIC11.86□□□□□ -0.51
LINC01561Q8N1V8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 MIR1238-201ENST00000408483 83 ntBASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01561Q8N1V8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms