Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 ATP5G2P4-201ENST00000442175 420 ntBASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 MIR6080-201ENST00000617359 66 ntBASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 AC084121.4-201ENST00000641598 221 ntBASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 AF228730.8-201ENST00000642140 221 ntBASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC28.52■■■□□ 2.16
SNAPC4Q5SXM2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC28.51■■■□□ 2.16
SNAPC4Q5SXM2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
SNAPC4Q5SXM2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC28.51■■■□□ 2.16
SNAPC4Q5SXM2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 GNAS-203ENST00000306120 1878 ntBASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 ARSEP1-201ENST00000420443 635 ntBASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC28.51■■■□□ 2.15
SNAPC4Q5SXM2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 CD81-202ENST00000381036 880 ntTSL 3 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC28.5■■■□□ 2.15
SNAPC4Q5SXM2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 LINC01225-203ENST00000563550 1244 ntBASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 AL645728.2-201ENST00000641974 660 ntBASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC28.49■■■□□ 2.15
SNAPC4Q5SXM2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
SNAPC4Q5SXM2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SNAPC4Q5SXM2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC28.48■■■□□ 2.15
SNAPC4Q5SXM2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC28.48■■■□□ 2.15
SNAPC4Q5SXM2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC28.48■■■□□ 2.15
SNAPC4Q5SXM2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SNAPC4Q5SXM2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SNAPC4Q5SXM2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC28.48■■■□□ 2.15
SNAPC4Q5SXM2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SNAPC4Q5SXM2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
SNAPC4Q5SXM2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 SPDYE7P-202ENST00000420373 878 ntBASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC28.47■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms