Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC092338.2-201ENST00000568827 1415 ntBASIC16.44■□□□□ 0.22
RFX4Q33E94 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX4Q33E94 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RFX4Q33E94 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFX4Q33E94 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.44■□□□□ 0.22
RFX4Q33E94 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 AC132938.6-201ENST00000623828 1655 ntBASIC16.43■□□□□ 0.22
RFX4Q33E94 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX4Q33E94 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX4Q33E94 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RFX4Q33E94 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.43■□□□□ 0.22
RFX4Q33E94 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX4Q33E94 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX4Q33E94 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.43■□□□□ 0.22
RFX4Q33E94 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.43■□□□□ 0.22
RFX4Q33E94 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.43■□□□□ 0.22
RFX4Q33E94 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX4Q33E94 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 RBM17P1-201ENST00000453646 1190 ntBASIC16.43■□□□□ 0.22
RFX4Q33E94 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX4Q33E94 BX088651.1-201ENST00000540551 451 ntBASIC16.43■□□□□ 0.22
RFX4Q33E94 AC112497.1-201ENST00000624824 639 ntBASIC16.43■□□□□ 0.22
RFX4Q33E94 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RFX4Q33E94 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RFX4Q33E94 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
RFX4Q33E94 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.43■□□□□ 0.22
RFX4Q33E94 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RFX4Q33E94 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX4Q33E94 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RFX4Q33E94 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.43■□□□□ 0.22
RFX4Q33E94 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.42■□□□□ 0.22
RFX4Q33E94 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX4Q33E94 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX4Q33E94 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.42■□□□□ 0.22
RFX4Q33E94 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX4Q33E94 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX4Q33E94 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX4Q33E94 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.42■□□□□ 0.22
RFX4Q33E94 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.42■□□□□ 0.22
RFX4Q33E94 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.42■□□□□ 0.22
RFX4Q33E94 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.42■□□□□ 0.22
RFX4Q33E94 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.42■□□□□ 0.22
RFX4Q33E94 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.42■□□□□ 0.22
RFX4Q33E94 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFX4Q33E94 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RFX4Q33E94 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
RFX4Q33E94 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.42■□□□□ 0.22
RFX4Q33E94 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.42■□□□□ 0.22
RFX4Q33E94 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX4Q33E94 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.42■□□□□ 0.22
RFX4Q33E94 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RFX4Q33E94 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
RFX4Q33E94 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.41■□□□□ 0.22
RFX4Q33E94 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.41■□□□□ 0.22
RFX4Q33E94 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.41■□□□□ 0.22
RFX4Q33E94 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFX4Q33E94 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 NFIC-211ENST00000641145 8399 ntBASIC16.41■□□□□ 0.22
RFX4Q33E94 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
RFX4Q33E94 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.41■□□□□ 0.22
RFX4Q33E94 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFX4Q33E94 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFX4Q33E94 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.41■□□□□ 0.22
RFX4Q33E94 FITM1-202ENST00000559294 800 ntBASIC16.41■□□□□ 0.22
RFX4Q33E94 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.41■□□□□ 0.22
RFX4Q33E94 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.41■□□□□ 0.22
RFX4Q33E94 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.41■□□□□ 0.22
RFX4Q33E94 AC116562.4-202ENST00000641738 218 ntBASIC16.41■□□□□ 0.22
RFX4Q33E94 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFX4Q33E94 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms