Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CCL20P78556 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.91□□□□□ -0.18
CCL20P78556 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL20P78556 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL20P78556 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.91□□□□□ -0.18
CCL20P78556 AC144831.1-201ENST00000573312 2656 ntBASIC13.91□□□□□ -0.18
CCL20P78556 AL024508.2-201ENST00000607749 1894 ntBASIC13.91□□□□□ -0.18
CCL20P78556 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
CCL20P78556 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CCL20P78556 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CCL20P78556 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL20P78556 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL20P78556 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.91□□□□□ -0.18
CCL20P78556 AF201337.1-201ENST00000520239 748 ntBASIC13.91□□□□□ -0.18
CCL20P78556 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.91□□□□□ -0.18
CCL20P78556 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL20P78556 AC008687.6-201ENST00000596318 630 ntBASIC13.91□□□□□ -0.18
CCL20P78556 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.91□□□□□ -0.18
CCL20P78556 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.91□□□□□ -0.18
CCL20P78556 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CCL20P78556 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CCL20P78556 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CCL20P78556 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL20P78556 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL20P78556 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CCL20P78556 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL20P78556 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL20P78556 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.9□□□□□ -0.18
CCL20P78556 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL20P78556 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.9□□□□□ -0.18
CCL20P78556 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CCL20P78556 AC009949.1-201ENST00000623048 1830 ntBASIC13.9□□□□□ -0.18
CCL20P78556 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CCL20P78556 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CCL20P78556 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL20P78556 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.9□□□□□ -0.18
CCL20P78556 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.9□□□□□ -0.18
CCL20P78556 AC091874.3-201ENST00000512672 1195 ntBASIC13.9□□□□□ -0.18
CCL20P78556 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.9□□□□□ -0.18
CCL20P78556 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
CCL20P78556 AC004264.1-201ENST00000608354 794 ntBASIC13.9□□□□□ -0.18
CCL20P78556 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.9□□□□□ -0.18
CCL20P78556 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CCL20P78556 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL20P78556 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.9□□□□□ -0.18
CCL20P78556 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.9□□□□□ -0.18
CCL20P78556 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CCL20P78556 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CCL20P78556 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCL20P78556 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL20P78556 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL20P78556 AC092053.1-201ENST00000605787 1936 ntBASIC13.9□□□□□ -0.18
CCL20P78556 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCL20P78556 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms