Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1LP55160 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1LP55160 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1LP55160 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 MTDHP3-201ENST00000594186 672 ntBASIC19.28■□□□□ 0.68
NCKAP1LP55160 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1LP55160 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1LP55160 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1LP55160 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1LP55160 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1LP55160 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1LP55160 AC009336.1-201ENST00000608941 1553 ntBASIC19.27■□□□□ 0.68
NCKAP1LP55160 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1LP55160 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1LP55160 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1LP55160 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1LP55160 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1LP55160 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1LP55160 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1LP55160 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1LP55160 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 STK19B-204ENST00000512515 211 ntBASIC19.27■□□□□ 0.68
NCKAP1LP55160 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.27■□□□□ 0.68
NCKAP1LP55160 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1LP55160 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.27■□□□□ 0.68
NCKAP1LP55160 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1LP55160 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCKAP1LP55160 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCKAP1LP55160 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NCKAP1LP55160 AL138688.1-201ENST00000624851 1594 ntBASIC19.27■□□□□ 0.67
NCKAP1LP55160 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCKAP1LP55160 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCKAP1LP55160 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCKAP1LP55160 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NCKAP1LP55160 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.26■□□□□ 0.67
NCKAP1LP55160 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.26■□□□□ 0.67
NCKAP1LP55160 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.26■□□□□ 0.67
NCKAP1LP55160 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.26■□□□□ 0.67
NCKAP1LP55160 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NCKAP1LP55160 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 AC004870.1-201ENST00000315132 882 ntBASIC19.26■□□□□ 0.67
NCKAP1LP55160 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.26■□□□□ 0.67
NCKAP1LP55160 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.26■□□□□ 0.67
NCKAP1LP55160 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.26■□□□□ 0.67
NCKAP1LP55160 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.26■□□□□ 0.67
NCKAP1LP55160 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1LP55160 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 AC148477.5-201ENST00000625164 1645 ntBASIC19.25■□□□□ 0.67
NCKAP1LP55160 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCKAP1LP55160 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 AL020989.1-201ENST00000422979 469 ntBASIC19.25■□□□□ 0.67
NCKAP1LP55160 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.25■□□□□ 0.67
NCKAP1LP55160 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms