Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC093512.1-201ENST00000617969 520 ntBASIC15.31■□□□□ 0.04
HCFC1P51610 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
HCFC1P51610 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.31■□□□□ 0.04
HCFC1P51610 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HCFC1P51610 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.31■□□□□ 0.04
HCFC1P51610 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HCFC1P51610 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.31■□□□□ 0.04
HCFC1P51610 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HCFC1P51610 AC004877.2-201ENST00000623941 599 ntBASIC15.31■□□□□ 0.04
HCFC1P51610 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HCFC1P51610 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HCFC1P51610 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.3■□□□□ 0.04
HCFC1P51610 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.3■□□□□ 0.04
HCFC1P51610 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.3■□□□□ 0.04
HCFC1P51610 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.3■□□□□ 0.04
HCFC1P51610 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.3■□□□□ 0.04
HCFC1P51610 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.3■□□□□ 0.04
HCFC1P51610 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.3■□□□□ 0.04
HCFC1P51610 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.3■□□□□ 0.04
HCFC1P51610 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HCFC1P51610 STK19B-204ENST00000512515 211 ntBASIC15.3■□□□□ 0.04
HCFC1P51610 AL031432.2-201ENST00000566714 459 ntBASIC15.3■□□□□ 0.04
HCFC1P51610 AL928711.1-201ENST00000570165 459 ntBASIC15.3■□□□□ 0.04
HCFC1P51610 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
HCFC1P51610 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HCFC1P51610 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.3■□□□□ 0.04
HCFC1P51610 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.3■□□□□ 0.04
HCFC1P51610 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HCFC1P51610 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.3■□□□□ 0.04
HCFC1P51610 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.3■□□□□ 0.04
HCFC1P51610 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCFC1P51610 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HCFC1P51610 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1P51610 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
HCFC1P51610 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.29■□□□□ 0.04
HCFC1P51610 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.29■□□□□ 0.04
HCFC1P51610 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.29■□□□□ 0.04
HCFC1P51610 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.29■□□□□ 0.04
HCFC1P51610 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1P51610 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1P51610 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1P51610 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.29■□□□□ 0.04
HCFC1P51610 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.29■□□□□ 0.04
HCFC1P51610 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1P51610 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
HCFC1P51610 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.29■□□□□ 0.04
HCFC1P51610 AC135050.7-201ENST00000624508 2218 ntBASIC15.29■□□□□ 0.04
HCFC1P51610 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1P51610 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1P51610 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1P51610 AC026471.1-201ENST00000564629 3026 ntBASIC15.29■□□□□ 0.04
HCFC1P51610 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
HCFC1P51610 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.29■□□□□ 0.04
HCFC1P51610 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.29■□□□□ 0.04
HCFC1P51610 AC004790.2-201ENST00000623588 572 ntBASIC15.29■□□□□ 0.04
HCFC1P51610 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.29■□□□□ 0.04
HCFC1P51610 KRT18P28-201ENST00000453838 1332 ntBASIC15.29■□□□□ 0.04
HCFC1P51610 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCFC1P51610 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.28■□□□□ 0.04
HCFC1P51610 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 AL390961.4-201ENST00000623958 2535 ntBASIC15.28■□□□□ 0.04
HCFC1P51610 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HCFC1P51610 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.28■□□□□ 0.04
HCFC1P51610 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.28■□□□□ 0.04
HCFC1P51610 BX276092.7-203ENST00000637198 1536 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms