Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.11■□□□□ 0.81
CLCN1P35523 SLC25A1P4-201ENST00000567977 778 ntBASIC20.11■□□□□ 0.81
CLCN1P35523 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.11■□□□□ 0.81
CLCN1P35523 AC008622.2-201ENST00000617006 1229 ntBASIC20.11■□□□□ 0.81
CLCN1P35523 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CLCN1P35523 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.11■□□□□ 0.81
CLCN1P35523 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.11■□□□□ 0.81
CLCN1P35523 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.11■□□□□ 0.81
CLCN1P35523 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.11■□□□□ 0.81
CLCN1P35523 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.11■□□□□ 0.81
CLCN1P35523 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.11■□□□□ 0.81
CLCN1P35523 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CLCN1P35523 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.11■□□□□ 0.81
CLCN1P35523 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CLCN1P35523 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CLCN1P35523 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CLCN1P35523 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.1■□□□□ 0.81
CLCN1P35523 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.1■□□□□ 0.81
CLCN1P35523 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.1■□□□□ 0.81
CLCN1P35523 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.1■□□□□ 0.81
CLCN1P35523 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CLCN1P35523 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 MFAP1P1-201ENST00000442257 1255 ntBASIC20.1■□□□□ 0.81
CLCN1P35523 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.1■□□□□ 0.81
CLCN1P35523 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.1■□□□□ 0.81
CLCN1P35523 AP003071.4-201ENST00000562276 1284 ntBASIC20.1■□□□□ 0.81
CLCN1P35523 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.1■□□□□ 0.81
CLCN1P35523 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.1■□□□□ 0.81
CLCN1P35523 PAUPAR-201ENST00000630360 2965 ntBASIC20.1■□□□□ 0.81
CLCN1P35523 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
CLCN1P35523 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CLCN1P35523 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CLCN1P35523 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC20.1■□□□□ 0.81
CLCN1P35523 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCN1P35523 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.1■□□□□ 0.81
CLCN1P35523 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.1■□□□□ 0.81
CLCN1P35523 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CLCN1P35523 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.09■□□□□ 0.81
CLCN1P35523 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 AC092068.3-201ENST00000587894 2016 ntBASIC20.09■□□□□ 0.81
CLCN1P35523 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
CLCN1P35523 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCN1P35523 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCN1P35523 TSPY7P-201ENST00000431358 1114 ntBASIC20.09■□□□□ 0.81
CLCN1P35523 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.09■□□□□ 0.81
CLCN1P35523 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.09■□□□□ 0.81
CLCN1P35523 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCN1P35523 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCN1P35523 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.09■□□□□ 0.81
CLCN1P35523 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CLCN1P35523 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.09■□□□□ 0.81
CLCN1P35523 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CLCN1P35523 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.09■□□□□ 0.81
CLCN1P35523 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCN1P35523 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLCN1P35523 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CLCN1P35523 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN1P35523 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN1P35523 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN1P35523 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.08■□□□□ 0.81
CLCN1P35523 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.08■□□□□ 0.81
CLCN1P35523 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CLCN1P35523 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN1P35523 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN1P35523 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN1P35523 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms