Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXA13P31271 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HOXA13P31271 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA13P31271 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA13P31271 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.07■□□□□ 0.8
HOXA13P31271 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXA13P31271 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.07■□□□□ 0.8
HOXA13P31271 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXA13P31271 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.07■□□□□ 0.8
HOXA13P31271 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXA13P31271 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.07■□□□□ 0.8
HOXA13P31271 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA13P31271 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXA13P31271 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA13P31271 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA13P31271 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
HOXA13P31271 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA13P31271 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
HOXA13P31271 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA13P31271 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA13P31271 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA13P31271 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HOXA13P31271 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXA13P31271 RPS2P28-201ENST00000314255 741 ntBASIC20.06■□□□□ 0.8
HOXA13P31271 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXA13P31271 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXA13P31271 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA13P31271 KLF4P1-201ENST00000412782 1185 ntBASIC20.06■□□□□ 0.8
HOXA13P31271 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXA13P31271 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXA13P31271 AL020989.1-201ENST00000422979 469 ntBASIC20.06■□□□□ 0.8
HOXA13P31271 AC092910.1-201ENST00000482027 1129 ntBASIC20.06■□□□□ 0.8
HOXA13P31271 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXA13P31271 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXA13P31271 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXA13P31271 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXA13P31271 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXA13P31271 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.06■□□□□ 0.8
HOXA13P31271 AC107918.4-202ENST00000641623 219 ntBASIC20.06■□□□□ 0.8
HOXA13P31271 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HOXA13P31271 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXA13P31271 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA13P31271 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
HOXA13P31271 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA13P31271 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXA13P31271 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA13P31271 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
HOXA13P31271 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA13P31271 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
HOXA13P31271 HLA-J-201ENST00000462773 1622 ntBASIC20.05■□□□□ 0.8
HOXA13P31271 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXA13P31271 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HOXA13P31271 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
HOXA13P31271 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXA13P31271 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HOXA13P31271 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.05■□□□□ 0.8
HOXA13P31271 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXA13P31271 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HOXA13P31271 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXA13P31271 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA13P31271 AP002414.3-201ENST00000589352 1468 ntBASIC20.05■□□□□ 0.8
HOXA13P31271 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXA13P31271 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXA13P31271 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXA13P31271 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXA13P31271 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXA13P31271 IGHV3-52-201ENST00000519770 353 ntBASIC20.04■□□□□ 0.8
HOXA13P31271 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXA13P31271 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXA13P31271 STK25P1-201ENST00000585406 838 ntBASIC20.04■□□□□ 0.8
HOXA13P31271 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 AC008735.5-201ENST00000623544 497 ntBASIC20.04■□□□□ 0.8
HOXA13P31271 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HOXA13P31271 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms