Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LHX6-205ENST00000464484 666 ntTSL 2 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 AC092902.6-201ENST00000641783 218 ntBASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 REM2-202ENST00000536884 1331 ntTSL 2 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 GOLGA6L17P-202ENST00000614358 1398 ntBASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.25■■□□□ 1.31
CSB-PGBD3P0DP91 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 AC004461.1-201ENST00000412461 403 ntBASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 CYB561-216ENST00000582297 897 ntTSL 3 BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 AL513210.1-201ENST00000629608 234 ntBASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSB-PGBD3P0DP91 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 CD99-202ENST00000381180 530 ntTSL 2 BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 CXCL1P1-201ENST00000502804 216 ntBASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CSB-PGBD3P0DP91 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 AC068137.2-201ENST00000605408 478 ntBASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.22■■□□□ 1.31
CSB-PGBD3P0DP91 AC105339.1-204ENST00000636249 355 ntBASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms