Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.81■□□□□ 0.6
FAM228BP0C875 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.81■□□□□ 0.6
FAM228BP0C875 AL359075.1-203ENST00000462729 1002 ntBASIC18.81■□□□□ 0.6
FAM228BP0C875 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.81■□□□□ 0.6
FAM228BP0C875 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.81■□□□□ 0.6
FAM228BP0C875 RNF126P1-202ENST00000569893 925 ntBASIC18.81■□□□□ 0.6
FAM228BP0C875 AC005332.3-201ENST00000589904 676 ntBASIC18.81■□□□□ 0.6
FAM228BP0C875 AL390719.2-201ENST00000606993 987 ntBASIC18.81■□□□□ 0.6
FAM228BP0C875 AC073912.3-201ENST00000624414 853 ntBASIC18.81■□□□□ 0.6
FAM228BP0C875 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FAM228BP0C875 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
FAM228BP0C875 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.81■□□□□ 0.6
FAM228BP0C875 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 AC010460.3-201ENST00000511359 1579 ntBASIC18.81■□□□□ 0.6
FAM228BP0C875 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM228BP0C875 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.8■□□□□ 0.6
FAM228BP0C875 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
FAM228BP0C875 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.8■□□□□ 0.6
FAM228BP0C875 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.8■□□□□ 0.6
FAM228BP0C875 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
FAM228BP0C875 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.8■□□□□ 0.6
FAM228BP0C875 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.8■□□□□ 0.6
FAM228BP0C875 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.8■□□□□ 0.6
FAM228BP0C875 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.8■□□□□ 0.6
FAM228BP0C875 AC112907.2-201ENST00000448639 330 ntBASIC18.8■□□□□ 0.6
FAM228BP0C875 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.8■□□□□ 0.6
FAM228BP0C875 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
FAM228BP0C875 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.8■□□□□ 0.6
FAM228BP0C875 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.8■□□□□ 0.6
FAM228BP0C875 AL139327.4-201ENST00000612362 153 ntBASIC18.8■□□□□ 0.6
FAM228BP0C875 AC006011.2-201ENST00000621313 1158 ntBASIC18.8■□□□□ 0.6
FAM228BP0C875 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
FAM228BP0C875 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.8■□□□□ 0.6
FAM228BP0C875 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
FAM228BP0C875 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.8■□□□□ 0.6
FAM228BP0C875 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.8■□□□□ 0.6
FAM228BP0C875 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM228BP0C875 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FAM228BP0C875 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM228BP0C875 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
FAM228BP0C875 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM228BP0C875 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM228BP0C875 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
FAM228BP0C875 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
FAM228BP0C875 RNF152P1-201ENST00000397754 604 ntBASIC18.79■□□□□ 0.6
FAM228BP0C875 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.79■□□□□ 0.6
FAM228BP0C875 KRT18P57-201ENST00000443599 1254 ntBASIC18.79■□□□□ 0.6
FAM228BP0C875 SPDYE13P-201ENST00000445314 798 ntBASIC18.79■□□□□ 0.6
FAM228BP0C875 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.79■□□□□ 0.6
FAM228BP0C875 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.79■□□□□ 0.6
FAM228BP0C875 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
FAM228BP0C875 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.79■□□□□ 0.6
FAM228BP0C875 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM228BP0C875 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
FAM228BP0C875 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms