Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC175P0C221 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC175P0C221 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC175P0C221 REXO1L10P-201ENST00000615707 1290 ntBASIC19.07■□□□□ 0.64
CCDC175P0C221 REXO1L12P-201ENST00000622156 912 ntBASIC19.07■□□□□ 0.64
CCDC175P0C221 FAM197Y4-202ENST00000622692 608 ntBASIC19.07■□□□□ 0.64
CCDC175P0C221 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC175P0C221 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 LYSMD4-203ENST00000378904 2122 ntBASIC19.07■□□□□ 0.64
CCDC175P0C221 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC175P0C221 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC175P0C221 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC175P0C221 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC175P0C221 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC175P0C221 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 AC116353.5-201ENST00000638148 1699 ntBASIC19.06■□□□□ 0.64
CCDC175P0C221 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC175P0C221 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
CCDC175P0C221 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 AC005915.1-201ENST00000624912 2018 ntBASIC19.06■□□□□ 0.64
CCDC175P0C221 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC175P0C221 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC175P0C221 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC175P0C221 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC175P0C221 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.05■□□□□ 0.64
CCDC175P0C221 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC175P0C221 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC175P0C221 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC175P0C221 AL355355.2-201ENST00000442321 338 ntBASIC19.05■□□□□ 0.64
CCDC175P0C221 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC175P0C221 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC175P0C221 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC175P0C221 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC175P0C221 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC175P0C221 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC175P0C221 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC175P0C221 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC175P0C221 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC175P0C221 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC175P0C221 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
CCDC175P0C221 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC175P0C221 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC175P0C221 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC175P0C221 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms