Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.12■□□□□ 0.17
P04436 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.12■□□□□ 0.17
P04436 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
P04436 AC073592.5-201ENST00000624854 528 ntBASIC16.12■□□□□ 0.17
P04436 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.12■□□□□ 0.17
P04436 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
P04436 PMPCAP1-201ENST00000508114 1576 ntBASIC16.12■□□□□ 0.17
P04436 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
P04436 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.12■□□□□ 0.17
P04436 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
P04436 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.11■□□□□ 0.17
P04436 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.11■□□□□ 0.17
P04436 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.11■□□□□ 0.17
P04436 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.11■□□□□ 0.17
P04436 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
P04436 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.11■□□□□ 0.17
P04436 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.11■□□□□ 0.17
P04436 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 SART3-203ENST00000546611 1184 ntBASIC16.11■□□□□ 0.17
P04436 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.11■□□□□ 0.17
P04436 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.11■□□□□ 0.17
P04436 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.11■□□□□ 0.17
P04436 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.11■□□□□ 0.17
P04436 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.11■□□□□ 0.17
P04436 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
P04436 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
P04436 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
P04436 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
P04436 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
P04436 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.1■□□□□ 0.17
P04436 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
P04436 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
P04436 AC135050.7-201ENST00000624508 2218 ntBASIC16.1■□□□□ 0.17
P04436 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
P04436 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
P04436 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.1■□□□□ 0.17
P04436 AL031284.1-201ENST00000419297 478 ntBASIC16.1■□□□□ 0.17
P04436 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.1■□□□□ 0.17
P04436 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.1■□□□□ 0.17
P04436 AC109462.3-201ENST00000573934 613 ntBASIC16.1■□□□□ 0.17
P04436 NKAPP1-205ENST00000585790 367 ntBASIC16.1■□□□□ 0.17
P04436 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
P04436 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.1■□□□□ 0.17
P04436 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.1■□□□□ 0.17
P04436 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.1■□□□□ 0.17
P04436 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 HLA-A-201ENST00000376802 1334 ntBASIC16.1■□□□□ 0.17
P04436 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.1■□□□□ 0.17
P04436 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P04436 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04436 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04436 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.09■□□□□ 0.17
P04436 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P04436 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04436 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms