Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.12■□□□□ 0.97
COL1A1P02452 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COL1A1P02452 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A1P02452 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.12■□□□□ 0.97
COL1A1P02452 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
COL1A1P02452 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.12■□□□□ 0.97
COL1A1P02452 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
COL1A1P02452 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
COL1A1P02452 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A1P02452 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A1P02452 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.12■□□□□ 0.97
COL1A1P02452 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A1P02452 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
COL1A1P02452 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.12■□□□□ 0.97
COL1A1P02452 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.12■□□□□ 0.97
COL1A1P02452 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.12■□□□□ 0.97
COL1A1P02452 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A1P02452 GPR89P-201ENST00000407924 1495 ntBASIC21.12■□□□□ 0.97
COL1A1P02452 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A1P02452 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
COL1A1P02452 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.11■□□□□ 0.97
COL1A1P02452 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.11■□□□□ 0.97
COL1A1P02452 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A1P02452 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A1P02452 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A1P02452 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A1P02452 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A1P02452 AC254562.1-201ENST00000417586 456 ntBASIC21.11■□□□□ 0.97
COL1A1P02452 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
COL1A1P02452 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.11■□□□□ 0.97
COL1A1P02452 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.11■□□□□ 0.97
COL1A1P02452 OR7E47P-204ENST00000575924 449 ntBASIC21.11■□□□□ 0.97
COL1A1P02452 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.11■□□□□ 0.97
COL1A1P02452 LINC02084-201ENST00000606069 1096 ntBASIC21.11■□□□□ 0.97
COL1A1P02452 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A1P02452 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A1P02452 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
COL1A1P02452 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A1P02452 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.11■□□□□ 0.97
COL1A1P02452 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A1P02452 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A1P02452 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A1P02452 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A1P02452 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.1■□□□□ 0.97
COL1A1P02452 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A1P02452 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.1■□□□□ 0.97
COL1A1P02452 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
COL1A1P02452 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A1P02452 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL1A1P02452 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A1P02452 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.1■□□□□ 0.97
COL1A1P02452 HCG4B-203ENST00000450128 991 ntBASIC21.1■□□□□ 0.97
COL1A1P02452 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.1■□□□□ 0.97
COL1A1P02452 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.1■□□□□ 0.97
COL1A1P02452 AC018845.2-201ENST00000568326 409 ntBASIC21.1■□□□□ 0.97
COL1A1P02452 MIR4751-201ENST00000578027 74 ntBASIC21.1■□□□□ 0.97
COL1A1P02452 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.1■□□□□ 0.97
COL1A1P02452 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A1P02452 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
COL1A1P02452 AC012317.2-201ENST00000623305 2251 ntBASIC21.1■□□□□ 0.97
COL1A1P02452 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
COL1A1P02452 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.1■□□□□ 0.97
COL1A1P02452 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL1A1P02452 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.1■□□□□ 0.97
COL1A1P02452 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A1P02452 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.1■□□□□ 0.97
COL1A1P02452 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.09■□□□□ 0.97
COL1A1P02452 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.09■□□□□ 0.97
COL1A1P02452 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 MYCLP1-201ENST00000372451 1075 ntBASIC21.09■□□□□ 0.97
COL1A1P02452 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COL1A1P02452 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COL1A1P02452 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.09■□□□□ 0.97
COL1A1P02452 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.09■□□□□ 0.97
COL1A1P02452 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 RFPL4AP1-201ENST00000530883 850 ntBASIC21.09■□□□□ 0.97
COL1A1P02452 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.09■□□□□ 0.97
COL1A1P02452 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.09■□□□□ 0.97
COL1A1P02452 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.09■□□□□ 0.97
COL1A1P02452 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COL1A1P02452 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A1P02452 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
COL1A1P02452 PTCHD3P3-201ENST00000403073 906 ntBASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms