Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.31■□□□□ 0.2
LGI1O95970 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.31■□□□□ 0.2
LGI1O95970 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 AC016396.2-201ENST00000562575 1417 ntBASIC16.31■□□□□ 0.2
LGI1O95970 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 RNF152P1-201ENST00000397754 604 ntBASIC16.31■□□□□ 0.2
LGI1O95970 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LGI1O95970 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.31■□□□□ 0.2
LGI1O95970 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.31■□□□□ 0.2
LGI1O95970 MTCL1P1-201ENST00000446207 792 ntBASIC16.31■□□□□ 0.2
LGI1O95970 AC068472.1-201ENST00000474589 881 ntBASIC16.31■□□□□ 0.2
LGI1O95970 DUX4L26-201ENST00000489078 1255 ntBASIC16.31■□□□□ 0.2
LGI1O95970 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.31■□□□□ 0.2
LGI1O95970 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.31■□□□□ 0.2
LGI1O95970 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LGI1O95970 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
LGI1O95970 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LGI1O95970 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.3■□□□□ 0.2
LGI1O95970 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.3■□□□□ 0.2
LGI1O95970 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LGI1O95970 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.3■□□□□ 0.2
LGI1O95970 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.3■□□□□ 0.2
LGI1O95970 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
LGI1O95970 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LGI1O95970 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.3■□□□□ 0.2
LGI1O95970 LYSMD4-203ENST00000378904 2122 ntBASIC16.3■□□□□ 0.2
LGI1O95970 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LGI1O95970 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.3■□□□□ 0.2
LGI1O95970 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LGI1O95970 TSPY5P-201ENST00000426936 936 ntBASIC16.3■□□□□ 0.2
LGI1O95970 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
LGI1O95970 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.3■□□□□ 0.2
LGI1O95970 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.3■□□□□ 0.2
LGI1O95970 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 GPR32P1-201ENST00000601788 811 ntBASIC16.3■□□□□ 0.2
LGI1O95970 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.3■□□□□ 0.2
LGI1O95970 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LGI1O95970 AC011676.5-201ENST00000624864 2660 ntBASIC16.3■□□□□ 0.2
LGI1O95970 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.3■□□□□ 0.2
LGI1O95970 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.3■□□□□ 0.2
LGI1O95970 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LGI1O95970 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LGI1O95970 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
LGI1O95970 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LGI1O95970 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LGI1O95970 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.29■□□□□ 0.2
LGI1O95970 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LGI1O95970 HBZP1-201ENST00000354915 429 ntBASIC16.29■□□□□ 0.2
LGI1O95970 AC096633.1-201ENST00000422446 749 ntBASIC16.29■□□□□ 0.2
LGI1O95970 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.29■□□□□ 0.2
LGI1O95970 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 AC092647.4-201ENST00000457211 535 ntBASIC16.29■□□□□ 0.2
LGI1O95970 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.29■□□□□ 0.2
LGI1O95970 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.29■□□□□ 0.2
LGI1O95970 AL049597.2-201ENST00000565575 961 ntBASIC16.29■□□□□ 0.2
LGI1O95970 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LGI1O95970 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.29■□□□□ 0.2
LGI1O95970 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
LGI1O95970 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms