Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC27.27■■□□□ 1.96
PCF11O94913 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCF11O94913 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCF11O94913 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC27.27■■□□□ 1.96
PCF11O94913 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
PCF11O94913 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC27.27■■□□□ 1.96
PCF11O94913 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCF11O94913 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
PCF11O94913 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCF11O94913 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCF11O94913 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCF11O94913 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC27.27■■□□□ 1.96
PCF11O94913 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCF11O94913 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCF11O94913 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC27.27■■□□□ 1.96
PCF11O94913 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC27.27■■□□□ 1.96
PCF11O94913 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC27.27■■□□□ 1.96
PCF11O94913 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC27.27■■□□□ 1.96
PCF11O94913 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC27.26■■□□□ 1.96
PCF11O94913 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC27.26■■□□□ 1.96
PCF11O94913 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC27.26■■□□□ 1.96
PCF11O94913 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC27.26■■□□□ 1.96
PCF11O94913 MIR4469-201ENST00000583919 79 ntBASIC27.26■■□□□ 1.96
PCF11O94913 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC27.26■■□□□ 1.96
PCF11O94913 ABALON-201ENST00000629058 1903 ntBASIC27.26■■□□□ 1.96
PCF11O94913 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC27.26■■□□□ 1.96
PCF11O94913 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCF11O94913 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCF11O94913 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCF11O94913 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCF11O94913 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC27.26■■□□□ 1.95
PCF11O94913 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCF11O94913 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCF11O94913 ATP6V0CP3-201ENST00000417255 467 ntBASIC27.26■■□□□ 1.95
PCF11O94913 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC27.26■■□□□ 1.95
PCF11O94913 PAWRP1-201ENST00000451083 565 ntBASIC27.26■■□□□ 1.95
PCF11O94913 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC27.26■■□□□ 1.95
PCF11O94913 SLC25A6P2-201ENST00000497974 877 ntBASIC27.26■■□□□ 1.95
PCF11O94913 AC107918.2-201ENST00000530817 355 ntBASIC27.26■■□□□ 1.95
PCF11O94913 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC27.26■■□□□ 1.95
PCF11O94913 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC27.26■■□□□ 1.95
PCF11O94913 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC27.26■■□□□ 1.95
PCF11O94913 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCF11O94913 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
PCF11O94913 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCF11O94913 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCF11O94913 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCF11O94913 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC27.25■■□□□ 1.95
PCF11O94913 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCF11O94913 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
PCF11O94913 ELL2P1-201ENST00000413990 1906 ntBASIC27.25■■□□□ 1.95
PCF11O94913 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
PCF11O94913 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCF11O94913 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC27.25■■□□□ 1.95
PCF11O94913 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC27.25■■□□□ 1.95
PCF11O94913 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC27.25■■□□□ 1.95
PCF11O94913 C20orf181-201ENST00000623918 480 ntBASIC27.25■■□□□ 1.95
PCF11O94913 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCF11O94913 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCF11O94913 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC27.24■■□□□ 1.95
PCF11O94913 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCF11O94913 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC27.24■■□□□ 1.95
PCF11O94913 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
PCF11O94913 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCF11O94913 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCF11O94913 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCF11O94913 MKNK2P1-201ENST00000437526 628 ntBASIC27.24■■□□□ 1.95
PCF11O94913 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC27.24■■□□□ 1.95
PCF11O94913 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC27.24■■□□□ 1.95
PCF11O94913 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC27.24■■□□□ 1.95
PCF11O94913 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC27.24■■□□□ 1.95
PCF11O94913 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC27.24■■□□□ 1.95
PCF11O94913 AC068137.2-201ENST00000605408 478 ntBASIC27.24■■□□□ 1.95
PCF11O94913 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCF11O94913 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC27.24■■□□□ 1.95
PCF11O94913 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCF11O94913 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCF11O94913 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCF11O94913 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCF11O94913 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCF11O94913 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
PCF11O94913 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC27.23■■□□□ 1.95
PCF11O94913 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCF11O94913 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC27.23■■□□□ 1.95
PCF11O94913 KLK8-202ENST00000320838 456 ntTSL 5 BASIC27.23■■□□□ 1.95
PCF11O94913 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC27.23■■□□□ 1.95
PCF11O94913 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCF11O94913 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC27.23■■□□□ 1.95
PCF11O94913 BCRP1-201ENST00000444246 691 ntBASIC27.23■■□□□ 1.95
PCF11O94913 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC27.23■■□□□ 1.95
PCF11O94913 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC27.23■■□□□ 1.95
PCF11O94913 CFL1-202ENST00000524553 860 ntTSL 2 BASIC27.23■■□□□ 1.95
PCF11O94913 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC27.23■■□□□ 1.95
PCF11O94913 ACTL9-202ENST00000612068 1252 ntBASIC27.23■■□□□ 1.95
PCF11O94913 AC106028.4-201ENST00000614509 607 ntBASIC27.23■■□□□ 1.95
PCF11O94913 GGTLC5P-201ENST00000617623 998 ntBASIC27.23■■□□□ 1.95
PCF11O94913 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCF11O94913 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC27.23■■□□□ 1.95
PCF11O94913 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCF11O94913 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms