Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH7O60245 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH7O60245 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PCDH7O60245 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH7O60245 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDH7O60245 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDH7O60245 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH7O60245 TSPY22P-201ENST00000427496 604 ntBASIC16.87■□□□□ 0.29
PCDH7O60245 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 GUSBP12-201ENST00000513727 720 ntBASIC16.87■□□□□ 0.29
PCDH7O60245 KRT18P21-201ENST00000515767 1272 ntBASIC16.87■□□□□ 0.29
PCDH7O60245 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH7O60245 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH7O60245 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDH7O60245 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH7O60245 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDH7O60245 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDH7O60245 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH7O60245 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PCDH7O60245 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH7O60245 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 AC096633.1-201ENST00000422446 749 ntBASIC16.86■□□□□ 0.29
PCDH7O60245 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH7O60245 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH7O60245 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH7O60245 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PCDH7O60245 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH7O60245 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH7O60245 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH7O60245 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH7O60245 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
PCDH7O60245 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH7O60245 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH7O60245 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH7O60245 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH7O60245 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDH7O60245 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
PCDH7O60245 AC005104.2-201ENST00000427818 678 ntBASIC16.85■□□□□ 0.29
PCDH7O60245 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
PCDH7O60245 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDH7O60245 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDH7O60245 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PCDH7O60245 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
PCDH7O60245 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH7O60245 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH7O60245 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDH7O60245 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.85■□□□□ 0.29
PCDH7O60245 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDH7O60245 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PCDH7O60245 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH7O60245 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH7O60245 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PCDH7O60245 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms