Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 HTR7P1-202ENST00000624664 4411 ntBASIC15.73■□□□□ 0.11
TRAF3IP2O43734 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 KRT17P6-201ENST00000453795 1220 ntBASIC15.73■□□□□ 0.11
TRAF3IP2O43734 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 AC092119.3-201ENST00000612618 583 ntBASIC15.73■□□□□ 0.11
TRAF3IP2O43734 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 AL138688.1-201ENST00000624851 1594 ntBASIC15.73■□□□□ 0.11
TRAF3IP2O43734 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAF3IP2O43734 PP12613-201ENST00000424958 2230 ntBASIC15.72■□□□□ 0.11
TRAF3IP2O43734 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 IGHV3-47-201ENST00000425060 335 ntBASIC15.72■□□□□ 0.11
TRAF3IP2O43734 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 AC002558.1-201ENST00000488906 803 ntBASIC15.72■□□□□ 0.11
TRAF3IP2O43734 AC122714.2-201ENST00000502787 707 ntBASIC15.72■□□□□ 0.11
TRAF3IP2O43734 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 AC009533.2-201ENST00000543664 586 ntBASIC15.72■□□□□ 0.11
TRAF3IP2O43734 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 AC093458.2-201ENST00000623150 629 ntBASIC15.72■□□□□ 0.11
TRAF3IP2O43734 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 NSUN5P1-202ENST00000421140 1535 ntBASIC15.72■□□□□ 0.11
TRAF3IP2O43734 NSUN5P2-203ENST00000457352 1529 ntBASIC15.72■□□□□ 0.11
TRAF3IP2O43734 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAF3IP2O43734 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 FAM220CP-201ENST00000395253 831 ntBASIC15.71■□□□□ 0.11
TRAF3IP2O43734 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 UPK3BP1-201ENST00000428678 509 ntBASIC15.71■□□□□ 0.11
TRAF3IP2O43734 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms