Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC2O43543 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC2O43543 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
XRCC2O43543 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.36■□□□□ 0.05
XRCC2O43543 KRT18P21-201ENST00000515767 1272 ntBASIC15.36■□□□□ 0.05
XRCC2O43543 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
XRCC2O43543 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
XRCC2O43543 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.36■□□□□ 0.05
XRCC2O43543 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
XRCC2O43543 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.36■□□□□ 0.05
XRCC2O43543 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC2O43543 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
XRCC2O43543 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
XRCC2O43543 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC2O43543 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC2O43543 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
XRCC2O43543 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.35■□□□□ 0.05
XRCC2O43543 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
XRCC2O43543 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC2O43543 TSPY22P-201ENST00000427496 604 ntBASIC15.35■□□□□ 0.05
XRCC2O43543 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.35■□□□□ 0.05
XRCC2O43543 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.35■□□□□ 0.05
XRCC2O43543 AL049597.2-201ENST00000565575 961 ntBASIC15.35■□□□□ 0.05
XRCC2O43543 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC2O43543 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.35■□□□□ 0.05
XRCC2O43543 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC2O43543 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.35■□□□□ 0.05
XRCC2O43543 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.34■□□□□ 0.05
XRCC2O43543 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.34■□□□□ 0.05
XRCC2O43543 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.34■□□□□ 0.05
XRCC2O43543 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
XRCC2O43543 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.34■□□□□ 0.05
XRCC2O43543 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.34■□□□□ 0.05
XRCC2O43543 AC096633.1-201ENST00000422446 749 ntBASIC15.34■□□□□ 0.05
XRCC2O43543 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
XRCC2O43543 AC090616.6-201ENST00000582640 721 ntBASIC15.34■□□□□ 0.05
XRCC2O43543 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 AL121956.5-201ENST00000625261 221 ntBASIC15.34■□□□□ 0.05
XRCC2O43543 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
XRCC2O43543 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
XRCC2O43543 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.34■□□□□ 0.05
XRCC2O43543 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.34■□□□□ 0.05
XRCC2O43543 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
XRCC2O43543 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC2O43543 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
XRCC2O43543 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
XRCC2O43543 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
XRCC2O43543 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
XRCC2O43543 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.33■□□□□ 0.04
XRCC2O43543 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
XRCC2O43543 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
XRCC2O43543 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
XRCC2O43543 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.33■□□□□ 0.04
XRCC2O43543 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.33■□□□□ 0.04
XRCC2O43543 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
XRCC2O43543 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms