Protein–RNA interactions for Protein: O15164

TRIM24, Transcription intermediary factor 1-alpha, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM24O15164 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM24O15164 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 FAM220CP-201ENST00000395253 831 ntBASIC18.2■□□□□ 0.5
TRIM24O15164 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM24O15164 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM24O15164 AC025062.2-201ENST00000605477 670 ntBASIC18.2■□□□□ 0.5
TRIM24O15164 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM24O15164 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM24O15164 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM24O15164 AP000867.4-201ENST00000641616 219 ntBASIC18.2■□□□□ 0.5
TRIM24O15164 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM24O15164 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM24O15164 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
TRIM24O15164 AC097374.2-201ENST00000618617 1306 ntBASIC18.2■□□□□ 0.5
TRIM24O15164 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM24O15164 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM24O15164 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM24O15164 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM24O15164 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM24O15164 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM24O15164 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
TRIM24O15164 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM24O15164 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM24O15164 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM24O15164 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM24O15164 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM24O15164 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM24O15164 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM24O15164 RPL13AP23-201ENST00000480739 586 ntBASIC18.19■□□□□ 0.5
TRIM24O15164 AC093909.1-201ENST00000504731 1122 ntBASIC18.19■□□□□ 0.5
TRIM24O15164 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM24O15164 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM24O15164 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM24O15164 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRIM24O15164 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM24O15164 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM24O15164 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM24O15164 AC100803.2-201ENST00000562459 1963 ntBASIC18.19■□□□□ 0.5
TRIM24O15164 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM24O15164 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM24O15164 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM24O15164 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM24O15164 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM24O15164 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM24O15164 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM24O15164 AC096633.1-201ENST00000422446 749 ntBASIC18.18■□□□□ 0.5
TRIM24O15164 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM24O15164 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM24O15164 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM24O15164 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM24O15164 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM24O15164 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM24O15164 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM24O15164 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM24O15164 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM24O15164 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM24O15164 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM24O15164 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM24O15164 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM24O15164 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRIM24O15164 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM24O15164 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM24O15164 POLD2P1-201ENST00000511220 997 ntBASIC18.17■□□□□ 0.5
TRIM24O15164 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM24O15164 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM24O15164 AC106730.1-201ENST00000566722 1090 ntBASIC18.17■□□□□ 0.5
TRIM24O15164 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM24O15164 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TRIM24O15164 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM24O15164 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM24O15164 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TRIM24O15164 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM24O15164 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms