Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SPDYE4A6NLX3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SPDYE4A6NLX3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.02■□□□□ 0.79
SPDYE4A6NLX3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.02■□□□□ 0.79
SPDYE4A6NLX3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 OR6D1P-202ENST00000641007 5290 ntBASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 RN7SKP199-201ENST00000410325 305 ntBASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 MIR3652-201ENST00000579335 131 ntBASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDYE4A6NLX3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 LINC00554-201ENST00000564841 3011 ntBASIC20■□□□□ 0.79
SPDYE4A6NLX3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 ANO7L1-203ENST00000602586 1720 ntBASIC20■□□□□ 0.79
SPDYE4A6NLX3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 ATP5G2P1-201ENST00000433580 426 ntBASIC20■□□□□ 0.79
SPDYE4A6NLX3 RASA4DP-201ENST00000460726 1199 ntBASIC20■□□□□ 0.79
SPDYE4A6NLX3 AC253576.1-201ENST00000511645 1156 ntBASIC20■□□□□ 0.79
SPDYE4A6NLX3 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 AC024243.1-201ENST00000609234 778 ntBASIC20■□□□□ 0.79
SPDYE4A6NLX3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 HYMAI.1-201ENST00000620949 238 ntBASIC20■□□□□ 0.79
SPDYE4A6NLX3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20■□□□□ 0.79
SPDYE4A6NLX3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPDYE4A6NLX3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC19.99■□□□□ 0.79
SPDYE4A6NLX3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms