Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.59□□□□□ -0.39
LINC01549A6NIU2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 AC106886.4-201ENST00000623557 2502 ntBASIC12.59□□□□□ -0.39
LINC01549A6NIU2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01549A6NIU2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
LINC01549A6NIU2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
LINC01549A6NIU2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
LINC01549A6NIU2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 AL023284.2-201ENST00000405850 579 ntBASIC12.58□□□□□ -0.4
LINC01549A6NIU2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 AC004980.1-204ENST00000429707 299 ntBASIC12.58□□□□□ -0.4
LINC01549A6NIU2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 MIR3180-5-201ENST00000583743 153 ntBASIC12.58□□□□□ -0.4
LINC01549A6NIU2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 PCDHA14-201ENST00000506751 2298 ntBASIC12.58□□□□□ -0.4
LINC01549A6NIU2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LINC01549A6NIU2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 AC092850.2-201ENST00000623821 2697 ntBASIC12.57□□□□□ -0.4
LINC01549A6NIU2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 AGGF1P2-201ENST00000426656 2106 ntBASIC12.57□□□□□ -0.4
LINC01549A6NIU2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms