Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC091304.2-201ENST00000564639 760 ntBASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RN7SL510P-201ENST00000581311 263 ntBASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 KRT89P-201ENST00000620027 1478 ntBASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.22□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AL645608.8-201ENST00000606034 2086 ntBASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AL845331.1-201ENST00000424978 1190 ntBASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FOSL1P1-201ENST00000511041 816 ntBASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC011840.4-201ENST00000578471 627 ntBASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AL592071.1-201ENST00000611956 408 ntBASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC139713.2-201ENST00000641328 2723 ntBASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.21□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TCRBV4S1A1TA0A5B7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TCRBV4S1A1TA0A5B7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.21□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.21□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms