Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 AC092865.7-201ENST00000641832 219 ntBASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF103-CHMP3A0A140T963 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 NEK4P2-201ENST00000580004 1012 ntBASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF103-CHMP3A0A140T963 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 LINC01568-207ENST00000641790 1380 ntBASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 KRT18P55-202ENST00000578578 1546 ntBASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF103-CHMP3A0A140T963 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms