Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1G3Q9Y6M4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CSNK1G3Q9Y6M4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1G3Q9Y6M4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1G3Q9Y6M4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
CSNK1G3Q9Y6M4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CSNK1G3Q9Y6M4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
CSNK1G3Q9Y6M4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1G3Q9Y6M4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1G3Q9Y6M4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1G3Q9Y6M4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1G3Q9Y6M4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 AL353593.2-201ENST00000602529 1483 ntBASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 AL589182.2-201ENST00000619332 1049 ntBASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 NOC2LP1-202ENST00000452600 2235 ntBASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 AC135050.7-201ENST00000624508 2218 ntBASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 AL390961.4-201ENST00000623958 2535 ntBASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1G3Q9Y6M4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 AL020989.1-201ENST00000422979 469 ntBASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 AC040169.1-201ENST00000565382 521 ntBASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 AC116407.2-201ENST00000613639 860 ntBASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 AC005593.1-201ENST00000624894 515 ntBASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CSNK1G3Q9Y6M4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms