Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 KRT16P1-201ENST00000399124 1418 ntBASIC16.73■□□□□ 0.27
AP4S1Q9Y587 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 KRT18P23-201ENST00000435622 1283 ntBASIC16.73■□□□□ 0.27
AP4S1Q9Y587 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.72■□□□□ 0.27
AP4S1Q9Y587 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 AC026691.1-201ENST00000602502 2017 ntBASIC16.72■□□□□ 0.27
AP4S1Q9Y587 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP4S1Q9Y587 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 PCDHB17P-201ENST00000539533 2393 ntBASIC16.71■□□□□ 0.27
AP4S1Q9Y587 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 AC009949.1-201ENST00000623048 1830 ntBASIC16.71■□□□□ 0.27
AP4S1Q9Y587 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 AC011506.1-201ENST00000474329 610 ntBASIC16.71■□□□□ 0.27
AP4S1Q9Y587 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 AC116353.5-201ENST00000638148 1699 ntBASIC16.71■□□□□ 0.27
AP4S1Q9Y587 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4S1Q9Y587 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms