Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 LINC02228-204ENST00000642115 2962 ntBASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH1Q9Y2L9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 KRT8P3-201ENST00000519669 1449 ntBASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 UNC93B4-201ENST00000505679 747 ntBASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 AC006058.3-201ENST00000606217 1069 ntBASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH1Q9Y2L9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 AL390719.1-204ENST00000412397 1219 ntBASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 SOX15-203ENST00000570788 1093 ntBASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 358.7 ms