Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 AC010947.1-201ENST00000623454 693 ntBASIC17.44■□□□□ 0.38
MKS1Q9NXB0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 AC018695.7-201ENST00000624587 2492 ntBASIC17.44■□□□□ 0.38
MKS1Q9NXB0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 AL355075.4-201ENST00000554988 638 ntBASIC17.43■□□□□ 0.38
MKS1Q9NXB0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 AC093525.9-201ENST00000624961 1746 ntBASIC17.43■□□□□ 0.38
MKS1Q9NXB0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 AL603756.1-201ENST00000606511 2163 ntBASIC17.43■□□□□ 0.38
MKS1Q9NXB0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MKS1Q9NXB0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 TSPY12P-201ENST00000421279 868 ntBASIC17.42■□□□□ 0.38
MKS1Q9NXB0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MKS1Q9NXB0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 AC008550.1-201ENST00000511500 884 ntBASIC17.41■□□□□ 0.38
MKS1Q9NXB0 AC124947.2-201ENST00000547118 1133 ntBASIC17.41■□□□□ 0.38
MKS1Q9NXB0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.41■□□□□ 0.38
MKS1Q9NXB0 NAPSB-206ENST00000562112 1266 ntBASIC17.41■□□□□ 0.38
MKS1Q9NXB0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms