Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 KRT17P6-201ENST00000453795 1220 ntBASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 MIR3180-1-201ENST00000580374 94 ntBASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 MIR3180-3-201ENST00000584616 94 ntBASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 AC092329.2-201ENST00000598402 547 ntBASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UBQLN4Q9NRR5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 FAM220CP-201ENST00000395253 831 ntBASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 UPK3BP1-201ENST00000428678 509 ntBASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 MINOS1P3-201ENST00000457048 203 ntBASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 AC091607.1-201ENST00000490318 1060 ntBASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 AC122714.2-201ENST00000502787 707 ntBASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 AP005901.3-202ENST00000581653 237 ntBASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 AC093458.2-201ENST00000623150 629 ntBASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN4Q9NRR5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms