Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 AL513477.1-201ENST00000602865 2407 ntBASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 PP12613-201ENST00000424958 2230 ntBASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK4Q9HAZ1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 AC005332.1-201ENST00000577698 1310 ntBASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 IGHGP-201ENST00000390555 1178 ntBASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 PCED1CP-201ENST00000419887 785 ntBASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLK4Q9HAZ1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 AC011498.5-201ENST00000592027 486 ntBASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 GPR32P1-201ENST00000601788 811 ntBASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLK4Q9HAZ1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms